Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYTGGDKREKQCFSSVDSNYNHTIKRQNFEIMKTIGTLIQEGSKLLSSHKVESPYLDCEIIMQHVLDVERSFIIMNYADQVSIKKEQLFWKLTKKRAERYPISQIIGNREFWSKNFIVNRHVLDPR---ADSEILVSAALKYYPNKKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNL----LGRAKMFPSSWTECKGLFDLIISNPPYIRRDKLKDLQAEVQKEPKIALDGGIDGLSCYLSIFPILKRCLKKNGFAILEIGEDQ-NDIDKIVPSYELAFQEYMYDLAGMKRCIVIKRT |
| 1NV8 Chain:A ((31-281)) | ---------------------------------------------------TETSVLEVLLIVSRVLGIRKEDLFLKDLG-VSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKT----VADIGTGSGAIGVSV-AKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSS--AHLPKDVLFEPPEALFGGEDGLDFYREFF---GRYDTSGKIVLMEIGEDQVEELKKIVSD-----TVFLKDSAGKYRFLLLNRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77643 for 1854 contacts (-41.9/contact) +
2D Compatibility (PS) -25592 + (NN) -8753 + (LL) 4820
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -130318.0 ( -70.29 by residue)
QMean score : 0.383
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