Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVPKKSKYRKVFKGRIKGNTKGGSTLSFGDYGLKTIEAGRVQSKHIETVRRVISRTLKRSGKIWIRIFPDTPISKKPTDVRMGKGKGSVEFWVFKAKPGRVLFEISSDVPMHLAKLALEKAMAKLPVKCKFISNYS
3BBX Chain:M ((1-132))
MLQPKRTKFRKMHKGRNRGLAQG-TDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDG-VPEELAREAFKLAAAKLPIKTTFVTKTV
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18355 for 881 contacts (-20.8/contact) +
2D Compatibility (PS) -12992 + (NN) 6480 + (LL) -248
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -38915.0 ( -44.17 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: