Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQTWNLLQAGQERNYKVAYINARIIDPETKLDIEGSLLTEGSKIIDFGESLFSNGVPSGVDETINCEGLVLMPGLVDIHVHFREPGQEHKETIYTGSKSAAAGGVTTVVCQPNTTPAIDSVILAKYLKYRALETSHVNIEFYAKITTSEE--KLTEVALLKEAGAVGFTDDGIPVMNPMIMRQALLYSSMLNVPIAQHAEDLNLSAGGAINEGKISEALGVKGILSASESVMVSRDILLMKDIENVHYHILHISSKDSLDAVKRAKDLGLNVTCEVTPHHFTLTEDIVKQHGAIAKMNPPLRTEEDRLAMVEGLKTGVIDCIATDHAPHDRSSKDLPLESAAFGIVGLETMLPLSLELYHSGQIDLFDILAKLTYKPADIIHVPRGRVQKNFVADLTLVDLNYEWEIKIDSFASKSKNSPFGGRKVKGRVVRTIVSGKTVYSQK |
3D6N Chain:A ((3-420)) | ----------------KLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL---VPEA--EIIDAKGLIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFTDDGSPVMDSSVMRKALELASQLGVPIMDHCEDDKL-AYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGG-HVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKEL-VEFAMPGIIGLQTALPSALELYRKGIISLKKLIEMFTINPARIIGVDLGTLKLGSPADITIFDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168470 for 3940 contacts (-42.8/contact) +
2D Compatibility (PS) -44931 + (NN) -17812 + (LL) 1120
1D Compatibility (HY) -28800 + (ID) 9150
Total energy: -268043.0 ( -68.03 by residue)
QMean score : 0.471
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