Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLLKKFYGIIYCLYHALIDTIYNDGMEHAGYLSFLILLSIFPFLIVLMALASTFANFLDQYNIGWTFIIDNMPQDILASLMPRIREIISGPPQSLLTLAIVGAIWTASSTIEGLRTILNKAYKVPVSPPYVLRRILSILQFLIITFIITLTIVFSTLVPMLIDFSYHGLSYTRYLLIEFVLFIVVSWLYFMLPNIRQNVSDVFPGSYIAVMLWTVSASAFKQYLRASFDQLDLIYGSLGGVVVSLLFFYMVSLIFIYGAKFNFQLKCFNGSR |
3RLF Chain:F ((40-95)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAG-MGLFVLFPLVCTIAIA--FTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30419 for 259 contacts (-117.4/contact) +
2D Compatibility (PS) -5729 + (NN) -858 + (LL) 15620
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -25486.0 ( -98.40 by residue)
QMean score : 0.117
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