Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKKEDENITEQVNLKWKGEFKKSINKTHKKFETFLPSQKFLAYSTKDNNFNIRFENKEELIKISDVLRANNED
3BIF Chain:A ((75-120))
------------------GQYRRDMVKTYKSFEFFLP----------DNEEGLKIRKQCALAALNDVRKFLSEE
General information:
TITO was launched using:
RESULT:
Template:
3BIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18950 for 229 contacts (82.8/contact) +
2D Compatibility (PS) -4997 + (NN) -2175 + (LL) 2320
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 10548.0 ( 46.06 by residue)
QMean score : 0.128
(partial model without unconserved sides chains):
PDB file :
Tito_3BIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BIF-query.scw
PDB file :
Tito_Scwrl_3BIF.pdb
: