Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHLFCFGYGYVARFLSKKLLSLSWKVSGTSRNQDVH------NTNFFNYDKVNKDTFQDV-----THVLVSIPPDG--DDALERYGHYFQNTKWLG----------------YLSAASVYGDHAGNWVKEESETKPIESRGKSRLRAEK--KWLN--SKLPVHIFRLTGIYGPGRNV-----------LVDLQLNKARNVQKEGHFFSR-------------IHVEDISNILFSSMQNIKPG---EIYNCADDLPATQSEVVAYAAELLNVSVPEPVEISSLPDHAQSFYLGSKKVSNIKVKRDLGISLVYPNYKVGLENLISNQQAPIERGE |
| 2C20 Chain:A ((5-316)) | --LICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLV------ASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67216 for 1926 contacts (-34.9/contact) +
2D Compatibility (PS) -27115 + (NN) -7996 + (LL) 448
1D Compatibility (HY) -11200 + (ID) 3600
Total energy: -116679.0 ( -60.58 by residue)
QMean score : 0.346
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