Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVKTSGPSKGREISVEVINTSDVFFKDNSTRYKVFYVNKNMILVMKQILKNAVEGTIEELEKGIKRLQN-----RSTKPKKEIEKNQRW
3VR2 Chain:A ((138-191))
------------------------------------YVDETKIIQHKIMVPNGIKGTVQKIESGSFTIDDPICVIETEQGLKELTMMQKW
General information:
TITO was launched using:
RESULT:
Template:
3VR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5487 for 174 contacts (31.5/contact) +
2D Compatibility (PS) -4202 + (NN) 6884 + (LL) 2012
1D Compatibility (HY) 1200 + (ID) 300
Total energy: 11081.0 ( 63.68 by residue)
QMean score : -0.015
(partial model without unconserved sides chains):
PDB file :
Tito_3VR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VR2-query.scw
PDB file :
Tito_Scwrl_3VR2.pdb
: