Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTIIY-GDVFEKVGVNISKVYGKFADSVVNEIPGASESNGEFWASGISLVSHMQSPLVPAAHMNTRLIYTSKQ------WFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGNPDAIMMSMPPLVKWM |
| 3DWR Chain:A ((23-283)) | --------------LQDDICEALEAEDGQA----TFVEDKWTREGGGGGRTRVMVDGAVIEKGGVNFSHVYG--------------GCN--FEAMGVSLVIHPKNPHVPTSHANVRLFVAEREGKEPVWWFGGGFDLTPYYAVEEDCRDFHQVAQDLCKPFGADVYARFKGWCDEYFFIPYRNEARGIGGLFFDDLNEWPFEKCFEFVQAVGKGYMDAYIPIVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSGGRTESILISLPPRARWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111487 for 1946 contacts (-57.3/contact) +
2D Compatibility (PS) -25185 + (NN) -9354 + (LL) 2076
1D Compatibility (HY) -20400 + (ID) 5500
Total energy: -169850.0 ( -87.28 by residue)
QMean score : 0.467
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