Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELMRSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLFHNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEV---DFNDDSPLETVAT--------KVDQVLS--LVQKKYEEYG--IKTQPYVFI---KASNGTY--GMGIITATSGEEILTLNKKKRH-----KMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNSTNCKFYDVSQVVENKTLSLWGTVSKLAVLALAVEMRSFHI |
| 3E04 Chain:A ((66-221)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------ERMPTPV--------IKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26843 for 784 contacts (-34.2/contact) +
2D Compatibility (PS) -13033 + (NN) -3320 + (LL) 12160
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -37936.0 ( -48.39 by residue)
QMean score : 0.181
|
|
|