Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKIILQLLISIVIIFTLASAFVFVVVCINKGKPERKDKLYEIDAAHSSWVQTIAYYLVKPILESALDRYIEKHGLIEYLKEIIQQKVEKGSINFYEIIEGSGSRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVIGQDNQREVGLGVIGMKEGGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYII----KNQTVQFKVGNKKVPLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFDEESVSIISLSLDDKQEIAAHHSTVE |
| 4DZ2 Chain:A ((5-87)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGAGGAGGVIPPNATLVFEVELLDV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30966 for 471 contacts (-65.7/contact) +
2D Compatibility (PS) -8653 + (NN) -3587 + (LL) 16464
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -29542.0 ( -62.72 by residue)
QMean score : 0.354
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