Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKK--LLSQYNHPKYKLELVKFNNWPDLMDAL----NSGRIDGASTLIEL----AMKSKQKGS------------NIKAVALGHHEGNVIMGQKGMHLNE-FNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGH-FSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS |
| 2G29 Chain:A ((28-260)) | -----------------------------NAPEVTTAKLGFIALTDAAPLIIAKEKGFYAKYGMP--DVEVLKQASWGTTRDNLVLGSASGGIDGAHILTPMPYLITMGTVTDGKPTPMYILARLNVNGQGIQLGNNYKDLKVGTDAAPLKEAFAKVTDPKVAMTFPGGTHDMWIRYWLAAGGMEPGKDFSTIVVPPAQMVANVKVNAMESFCVGEPWPLQTVNQGVGYQALTTGQLWKDHPEKAFGMRADWVDQNPKAAKALL----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95504 for 1658 contacts (-57.6/contact) +
2D Compatibility (PS) -22342 + (NN) -9804 + (LL) 7288
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -133012.0 ( -80.22 by residue)
QMean score : 0.422
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