Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKIYILLLFLIFLSSCANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIKHGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNN------KY---------VTSFLLMPTV-IVVNSDLQGDIKI----RGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVHQFQNHAMQLSKTSKV----IEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTMLNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDA-KSIRKDVSEQSDQSIENLKNIPLIPKSKLPDIPHHKFLEMIQ |
| 4R73 Chain:A ((3-281)) | ---------------------------KGRLVIYCSATNVMCENAAKTFEQKYDVKTSFIRNGSGSTFAKIEAEKNNPQADVWYGGTLD----------PQSQAGELGLLEAYRSPNIDQIMPKFQDPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSSGTAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHDYALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFALSKEGQETAWKKGQALQTLTNTTAEQS------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67316 for 2189 contacts (-30.8/contact) +
2D Compatibility (PS) -26535 + (NN) -1288 + (LL) 4856
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -102533.0 ( -46.84 by residue)
QMean score : 0.427
|
|
|