Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVASASSLSQDEVKELNRLLGKVIHAFDETKEK
1Z9C Chain:A ((9-136))
-----KLENQLSFLLYASSREMTKQY-KPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTILGLSKQSGEDLKQLKSAL-------------
General information:
TITO was launched using:
RESULT:
Template:
1Z9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67728 for 816 contacts (-83.0/contact) +
2D Compatibility (PS) -13045 + (NN) -1527 + (LL) 1160
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -95240.0 ( -116.72 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9C-query.scw
PDB file :
Tito_Scwrl_1Z9C.pdb
: