Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKVAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
3R13 Chain:A ((47-255))
------IEHTNLKPFATPDDIKKLCLEARENRFHGVCVNPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSSGVKIVQGGE-----
General information:
TITO was launched using:
RESULT:
Template:
3R13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104048 for 1871 contacts (-55.6/contact) +
2D Compatibility (PS) -23483 + (NN) -9577 + (LL) 540
1D Compatibility (HY) -20400 + (ID) 5800
Total energy: -162768.0 ( -87.00 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_3R13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R13-query.scw
PDB file :
Tito_Scwrl_3R13.pdb
: