Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGMGPSFNTAYRYYKNDSHAKEM---------TPTAFDSYL-KGTNRTYSNDPKQNITDSAAGGTAFSSGHKTYNGAIG-VDSNK---QKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQFYKDKINGKHKVDVLLGGGAKYF---GKSNGNLDKKFKKDGYDLATNSKDLSKSDKDKVLGLFA-DKNMPLAIDASKD----EPSLADMQQSA---LSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSEMEGFEKAFDDAIQYAKKHKD-TLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMTEKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLQKLLKKEKDEKSADVEKQTKALQHAIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK |
| 2X98 Chain:A ((6-416)) | --------------------------------------------------NAIAYIVDGMGQTQISAARYLNAYKTAPERFPLNVSPAETPTGFDAFSSRGSMTTFPDDPYETTTDSAAAATAFASGVKTYNGAIGGVQTSGGGFQRVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQTEIARQYIEET-----QPDVILGGQRRDFEADASNGGTLVDAARDNGYTIAETAAELDAVDDPPVLGLFSQESHLDYYLDRKNDPENTQPNLDAMVDAGVDLLSSAGDPDKGFFLLVESGRVDHAGHANYPAQVAEQYEATQVA-GQLVEYAETTAEPTFLVSTGDHECGGLTLGRDSPYEVEYDVLAAQKATTSRLRDLLAGVR--------------SADELESIVAAHTGITALTDRE-------VAKLRDA-PGSISTILAERAGIAFTTDGHTGTDVPVFAHGPNAARFDAARDNT----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 59616 for 3509 contacts (17.0/contact) +
2D Compatibility (PS) -41797 + (NN) -19175 + (LL) 5596
1D Compatibility (HY) -20400 + (ID) 7300
Total energy: -23460.0 ( -6.69 by residue)
QMean score : 0.442
|
|
|