Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLAEAIKEQRELKRWSQEELANILKVSRQSVSKWESAKNYPSLDILIAMSDLFGISLEHLIKGDARFKKVILEGNYRE
3JXC Chain:L ((5-67))
--MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD--------------
General information:
TITO was launched using:
RESULT:
Template:
3JXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25299 for 438 contacts (-57.8/contact) +
2D Compatibility (PS) -6916 + (NN) -1400 + (LL) 1496
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -37069.0 ( -84.63 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3JXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JXC-query.scw
PDB file :
Tito_Scwrl_3JXC.pdb
: