Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLILFNRNAFLLACMFVSSVYANAVLDAYAVENPYITITLTSLLAPLSMLAFLKTPRNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLVALVYGVLFYLLLYFENPYFRLLSFLGSSFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLIFLACIFLSAQNLKKYRMIGVLLLLGALDFHFFKISDLKEVGNIELVSTRTPQDLKFDSNYLNNIENNILKEIKLAQSKQKTLIVFPETAYPIALENSPFKTQLEDLSDKIAILIGTLRAQGYSLYN-SSFLFSKKSVQIADKVILA-PFGEIMP--LPEFLQKPLE---KLFFGESAYLYRNA-PHFSDFTLDDFTFRPLICYEGTSKPAYSSSPSKVFILMSNNAWFSPSIEPTLQRTLLKYYARRYDKIILHSANFSTSYILSPSLLGDILFRKRS |
| 1QE3 Chain:A ((261-397)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQETLDAALEYLLGKPLAEKAADLYPRSLESQIHMMTDLLFWRPAVAYASAQSHYAPVWMYRFDWHP-------EKPPYNKAFHALELPFVFGNLDGLITDEVKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETRETVILDSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3767 for 753 contacts (-5.0/contact) +
2D Compatibility (PS) -13198 + (NN) 337 + (LL) 19660
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -6268.0 ( -8.32 by residue)
QMean score : 0.109
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