Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILMMENRMPKEIQKTEASEKSIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYA----KTRVNGAMLDYLRSLDV----------ISRSSRKLIKSIDIEITKYLNEHGKEPSDEHLAEALGENIEKIREAKT---ASDIYAL-VPIDEQFNA--IEQDEITQKIEAEE---LLEHIQKVLNQMSEREQILIQLYY----FEELNLSEIKEILGITESRISQIIKEVIKKVRQSLGVNHG |
| 1L9Z Chain:H ((221-424)) | --------------------------------------------------------------GLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQEL-----------GREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPI------DFIPDENLPSPVEAAAQSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRTRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27974 for 864 contacts (-32.4/contact) +
2D Compatibility (PS) -17552 + (NN) -4881 + (LL) 7228
1D Compatibility (HY) -9200 + (ID) 300
Total energy: -52679.0 ( -60.97 by residue)
QMean score : -0.012
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