Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIKVSGDKKVIEVSIPLTSISGKARVKIRHAFSDYGI------STATRKIPFSLKHYVEWQIGYDVPIKDKEKFELTTLKDEKYHFLGANNKVKTLYELSEMIYYAKRLGLISLENLENTLKFLEKQKQFIEDNFMITRERFRSHQFGGMDFELSRISYPLLIHSFDDNELSEIVIKEQQYGSKTQAMLYFCFSILELKTATPLLNRTAMPKEHALLIIHETNALVFLEMLKIFGLLSQVHHNDVLKILEKILQN |
2JWP Chain:A ((33-101)) | -----------------PLEGRVGRA--------SDYGMKLPILRSNPEDQVLYQTERYNEDSFGYDIPIKEEGEYVL-VLKFAEVYFAQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKGTAD------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4094 for 239 contacts (17.1/contact) +
2D Compatibility (PS) -6457 + (NN) 2402 + (LL) 9720
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: 4209.0 ( 17.61 by residue)
QMean score : 0.161
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