Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQALKSLLEVITKLQNLGGYLM----HIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQEEMQDNPKIVENKEWHKENRTYLVAEGLGITIMILGILVLLGLWMPLMGVVGGLLVAGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS |
| 4CJ0 Chain:A ((250-315)) | --------------RNFGGFIMPENEHDERF----------FVPWSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDEEYLRDFENRAAQFSKKIEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSIVRTSQNHGYGRTLGTTYYWGCNGTVVRQTM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3652 for 315 contacts (11.6/contact) +
2D Compatibility (PS) -6673 + (NN) 172 + (LL) 2828
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -4521.0 ( -14.35 by residue)
QMean score : 0.124
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