Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEMLKEELLQSIREVKDYPKKGILFKDITTLLNYPKLFNKLIDALKKRYLALNIDFIVGIEARGFILGSAFAYALGVGFVPVRKKGKLPAHTLSQSYSLEYGSDSIEIHSDAFRGIKGVRVVLVDDLLATGGTALASLELIKALQAECIEACFLIGLKELPGIQLLEEHVKTFCLLEC
4M0K Chain:A ((27-198))
----ALETLKQAIRTVPDFPEPGIQFKDITPVLGHPELLRLAIEALLEPFQEQEITKVVGIESRGFILGGMLAHHLDAGFVPVRKKGKLPYQTLAESYQLEYGTDTIEMHIDAIE--PGDRVLIHDDVIATGGTAEATIRLVERAGGEVVGCAFLIELTGLQGRKRLPAHVPVHTVLQL
General information:
TITO was launched using:
RESULT:
Template:
4M0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186184 for 1374 contacts (-135.5/contact) +
2D Compatibility (PS) -18354 + (NN) -3115 + (LL) 472
1D Compatibility (HY) -13600 + (ID) 4200
Total energy: -224981.0 ( -163.74 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4M0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M0K-query.scw
PDB file :
Tito_Scwrl_4M0K.pdb
: