Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKILILGIGNILFGDEGIGVHLAHYL----KRNFSFFPSVDIVDGGTMAQQLIPLITSYE--KVLILDCVSAKGVEIGSVYAFDFKDAPKEITWAGSAHEVEMLHTL-RLTEFLGDLPKTFIVGLVPFVIGSETTFKLSSEMLNALETALKAIETQLNAWGVKMQRTDHIALDCIAELSYKGF
2I8L Chain:A ((4-140))
-----VLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWV------VIDGGSAPENDIVAIRELRPTRLLIVDATDM-GLNPGEIRIIDPDDIAE--MFMMTTHNMPLNYLIDQLKEDIGEV---IFLGIQPDIVG--FYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE-------------
General information:
TITO was launched using:
RESULT:
Template:
2I8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142685 for 1057 contacts (-135.0/contact) +
2D Compatibility (PS) -13694 + (NN) -4394 + (LL) 2336
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -169337.0 ( -160.21 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_2I8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I8L-query.scw
PDB file :
Tito_Scwrl_2I8L.pdb
: