Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLGLSSLGGTLEFYDFIIFVFFTSIIAKHFF-PNTLSPIWSEINTYGIF--AAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAH-----YLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYLRRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISIS---------------MLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILG-----------LVGIVSS--IIFTGFLADKI--KPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTI-ILYFLACFCAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA |
| 4GBZ Chain:A ((16-411)) | -----VATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSE--SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISG------------VGSAWPELGFTSINPDNTVPVYLAGYVPEF-VIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAP---EVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFS--LGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298888 for 2978 contacts (-100.4/contact) +
2D Compatibility (PS) -34579 + (NN) 7724 + (LL) 2528
1D Compatibility (HY) -30000 + (ID) 4400
Total energy: -357615.0 ( -120.09 by residue)
QMean score : 0.214
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