Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISKEEVLEYIGSLSVLELSELVKMFEEKFGVSATPTVVAGAAVAGGAAAESEEKTEFNVILADSGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK
1RQS Chain:A ((48-120))
----------------------------------------------------AEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK
General information:
TITO was launched using:
RESULT:
Template:
1RQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17355 for 497 contacts (-34.9/contact) +
2D Compatibility (PS) -8062 + (NN) -2454 + (LL) 4688
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -30383.0 ( -61.13 by residue)
QMean score : 0.749
(partial model without unconserved sides chains):
PDB file :
Tito_1RQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RQS-query.scw
PDB file :
Tito_Scwrl_1RQS.pdb
: