Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFK-KQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKSDNPQANSMQDSMTHENFNNAYPTNYNAPSQDPFSQAQSYPQNAYTKENSQAQPSKYQNSVPEINIDEEEIPF
4MZ9 Chain:A ((6-95))
-VNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGG-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37588 for 481 contacts (-78.1/contact) +
2D Compatibility (PS) -9608 + (NN) -2792 + (LL) 2844
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -56394.0 ( -117.24 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_4MZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZ9-query.scw
PDB file :
Tito_Scwrl_4MZ9.pdb
: