Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNGEKVDFFLALWRFV-LWVLSMGLLVGFVAPFIFKFFLHDKFSSTHIEIIKEEI
3A0H Chain:A ((261-290))
-----------------------------------------------------------------------------------------QYASF----NNSRSLHFFLAAWRVVGVWFAALGISTMAFNLNGFNFNHSVIDAKGNVINTWADI
General information:
TITO was launched using:
RESULT:
Template:
3A0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5700 for 107 contacts (-53.3/contact) +
2D Compatibility (PS) -2982 + (NN) -2034 + (LL) 8236
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -7980.0 ( -74.58 by residue)
QMean score : 0.099
(partial model without unconserved sides chains):
PDB file :
Tito_3A0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0H-query.scw
PDB file :
Tito_Scwrl_3A0H.pdb
: