Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFFLLKKFSEFLNTQTHFNLKRLNASSFLLETFSKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDQEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDLDFKGLLDILEKDFLSYQHKELEHKKNQIIKRLNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKECMIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVRDAAEESVLEMFMPVKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRDIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNGYEIDYTQRKFVKIIKGAHVIYSKYRTISLKDT |
| 1U83 Chain:A ((105-157)) | -KYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLVLSEVGSKDQSSEEWLEYIVEDMEAGAEKVITEQIVDDIISSDIDINRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTFF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10365 for 302 contacts (-34.3/contact) +
2D Compatibility (PS) -5107 + (NN) 1338 + (LL) 23632
1D Compatibility (HY) -2800 + (ID) 850
Total energy: 5848.0 ( 19.36 by residue)
QMean score : 0.408
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