Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKT--GREKHI-TLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
3BPX Chain:A ((34-139))
-----------------------------------LTDAQVACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIPLILKVEERWEDLLFRDFTEDERKLFRKMCRRLAE
General information:
TITO was launched using:
RESULT:
Template:
3BPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21724 for 622 contacts (-34.9/contact) +
2D Compatibility (PS) -11541 + (NN) -6206 + (LL) 2992
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -46379.0 ( -74.56 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3BPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BPX-query.scw
PDB file :
Tito_Scwrl_3BPX.pdb
: