Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKDMQIDAVYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIADNPNGNILVVSHGMSLTLLLYLLQGGTIEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK
1EBB Chain:A ((3-202))
------TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQ--RGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPL-DHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHIE--
General information:
TITO was launched using:
RESULT:
Template:
1EBB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76948 for 1627 contacts (-47.3/contact) +
2D Compatibility (PS) -21604 + (NN) -7133 + (LL) 984
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -124101.0 ( -76.28 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1EBB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EBB-query.scw
PDB file :
Tito_Scwrl_1EBB.pdb
: