Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLA-KKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF |
3TQW Chain:A ((4-240)) | -----------------------------------MVRVGTIAGPETQLMEVAKQVALNRYGLHVNIITFSDYNTPNEALADGSVDANMFQHLPYLKAQIEMRGYKIVSIGKTFVYPMGLYSKKITALTQLKTGAKIAVPSDPSNEARALLLLEKAQLIQLKTH--INATPMDIASNPKKLKIVELDAAQLSRSLGDVDLAAINTNYAIPAGLSPSRDALLTE-GPNSPYANVVAVREDDKNDPRLKQLVSALHSPAVLSAAKKIFGDGAIPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56405 for 1997 contacts (-28.2/contact) +
2D Compatibility (PS) -25519 + (NN) -12871 + (LL) 2100
1D Compatibility (HY) -18000 + (ID) 5500
Total energy: -116195.0 ( -58.18 by residue)
QMean score : 0.564
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