Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIENMKAFNKVAELKSISAAANELHHLQSNMSNKIKNIEKQFQTQLFFRHSNGVELTKEGEKIYQQFKKMILLWEETIDI---INNEEETISIGITQSSLPMEFNTIIKKFYQQFPNKKLSIVSGSTSELIPKIANRELTIAYVAELEKENLFQDSQIISQTLSWDKLVFAGNTAGKSVQKILAEERLYVFSKQCYSYRALATLINDFNIPNVSISEINIPETLVEICNNKLGVGIIPESIALNYHFLNYETLPTEYAALRKTLIYHADHTISNGEKWLIEKSKPAFKS |
3K1N Chain:A ((1-128)) | MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38902 for 732 contacts (-53.1/contact) +
2D Compatibility (PS) -13561 + (NN) -6081 + (LL) 12608
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -57036.0 ( -77.92 by residue)
QMean score : 0.515
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