Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFNTISEKMDQYISPLANKLSQQRHLKATRDAFMSMLPITLFGSIPIILKAAPVTDDTKNGFLLAWANFAEKYDLILNWISGITLGAMSLYICVGITYYLCKHYHEDFLRPLMFSIAGFFMLVLNPIKMGWDGKEVDISFLDGRGILLSIFVAIVTVEGYHWMRKKNVGRITMPDSVPASLSETFAALVPGIILMTFFSIIFIIFNLLDTTAIQFLYEKMAPSFKAADSLPFTILSIFLVHLFWFFGVHDAALAGILGPIRDGNLSINAAEKMAGQDLTNIFTTPFWTYFVIIGGSGSVLALAFLMMRSKSKQLSTVGKVGFLPSIFGISEPLIFGTPL-----MLNPIFFFPFIFTSVFNGVITYLCMYFGIVGKTFAVFSWQMPAPIGAFLSTMDWRAIVLVFILIFLNGLMYYPFLKVYEKNLVALEKEAEEENIAAN |
2FYN Chain:A ((201-301)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPFVIAALVAIHIWAFHSTGNNNPTGV---------EVRRTSKAEAQKDT----VPFWPYFII----KDVFALAVVL-------LVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPF--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27596 for 399 contacts (-69.2/contact) +
2D Compatibility (PS) -9550 + (NN) -3192 + (LL) 27364
1D Compatibility (HY) -12000 + (ID) 1600
Total energy: -26574.0 ( -66.60 by residue)
QMean score : -0.429
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