Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGD-ETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDV--RDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDL-EKFERLIDALEDLEDVQKVYHNVELED |
1LFP Chain:A ((7-242)) | ----WAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSE--EELLEKAIEVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGV-PIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFEIPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48329 for 1734 contacts (27.9/contact) +
2D Compatibility (PS) -24710 + (NN) -8925 + (LL) 656
1D Compatibility (HY) 6800 + (ID) 1900
Total energy: 20250.0 ( 11.68 by residue)
QMean score : 0.211
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