Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAASSGYLMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER
3BXF Chain:A ((68-88))
--------------IEAVAEMMTPDSKNRELLFVP---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1086 for 60 contacts (-18.1/contact) +
2D Compatibility (PS) -2238 + (NN) -542 + (LL) 9020
1D Compatibility (HY) -3200 + (ID) 500
Total energy: 1454.0 ( 24.23 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_3BXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BXF-query.scw
PDB file :
Tito_Scwrl_3BXF.pdb
: