Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNELEVGELGAD-GYLLFVMTPEEKITMPIRAFEPNQKLAFEWDQD--EVAFELNEITANKTRLTFTEQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
1XN5 Chain:A ((10-86))
-----------------EVRFNAPIEKVWEAVSTSEGLAFWFME---NDLKAETGHHFHLQSPFGPSPCQVTDVERPIKLSFTWDTDGWSVTFHLKE------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XN5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39822 for 462 contacts (-86.2/contact) +
2D Compatibility (PS) -7911 + (NN) -1913 + (LL) 7024
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -50022.0 ( -108.27 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1XN5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XN5-query.scw
PDB file :
Tito_Scwrl_1XN5.pdb
: