Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRD-VNATINHIRELGIRPSIAISPDTEIEQIYPFL---GKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLREIIQER
1H1Z Chain:A ((9-222))
---IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLD----IEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPG---EVISALRKSVE--
General information:
TITO was launched using:
RESULT:
Template:
1H1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178995 for 1819 contacts (-98.4/contact) +
2D Compatibility (PS) -22375 + (NN) -6220 + (LL) 820
1D Compatibility (HY) -18000 + (ID) 3850
Total energy: -228620.0 ( -125.68 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1H1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H1Z-query.scw
PDB file :
Tito_Scwrl_1H1Z.pdb
: