Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKFIALFSVLLLTSSLFLSSCSLPGLGGSSKDTIRIGAMATTESQIVSNILKELIEHDTGLKVEIVNNLGSTIVQHQAMLNGDVDITATRYTGTDLVGPLGEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKKYNLNTVSDMRKVENELTAGVDNSWMEREGDGYKAFSKAYDIEFKKIFPMQIGLIYTALKNNQMDVALGYSTDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEMQKLNYEADGKLKEPSIVAQEFLQKNNYFEGKN
3PPP Chain:A ((40-311))---------------------------------DTIKIGAQSMTESEIVANMIAQLIEHDTDLNTALVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKNASQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPPYDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHHYFD---


General information:
TITO was launched using:
RESULT:

Template: 3PPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103744 for 2340 contacts (-44.3/contact) +
2D Compatibility (PS) -28995 + (NN) -9964 + (LL) 1848
1D Compatibility (HY) -27600 + (ID) 8150
Total energy: -176605.0 ( -75.47 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3PPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PPP-query.scw
PDB file : Tito_Scwrl_3PPP.pdb: