Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDAEIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIGAMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAIYDQLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNRAMRLTGMVTSKDILEKN-------------PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKTDTGEEADYEFKVSPQMTNSLGTLSYGVFTQVVCEVVQQKLFSMKKRNVAIENVTMYFLKPVQMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER |
3DDJ Chain:A ((18-216)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGMNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLD----------------------------EIFPVKVFMSTKVQTIYK---EVRLDQAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLAKAV-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72621 for 1304 contacts (-55.7/contact) +
2D Compatibility (PS) -18997 + (NN) 724 + (LL) 20236
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -80558.0 ( -61.78 by residue)
QMean score : 0.300
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