Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAKRWIALGIVFALLIVSALAKFTSSQIASKEESSPTFVESLFADTGELTETVIEEGGNDTIAVLSVDGTIQD----TGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPGGGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVIMQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYDAPGDFSSLFSVAAQKISGQNADISQLIKLTGTLKAPRMMYLYGE |
| 3BF0 Chain:A ((326-533)) | ------------------------------------------------------------DSIGVVFANGAIMDGEETQGNVGGDTTAA---------QIRDARLDPKVKAIVLRVNSPGGSVTAS-EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60880 for 1615 contacts (-37.7/contact) +
2D Compatibility (PS) -22721 + (NN) -13472 + (LL) 9952
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -104971.0 ( -65.00 by residue)
QMean score : 0.499
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