Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFMELKV-AKSDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA
2YX5 Chain:A ((1-81))
MYKATVIIKLKKGVLNPEGRTIQRALNFLGFNNVKEVQTYKMIDIIME-ENEEKVKEEVEEMCKKLLANPVIHDYEIKVEK-
General information:
TITO was launched using:
RESULT:
Template:
2YX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30832 for 465 contacts (-66.3/contact) +
2D Compatibility (PS) -8102 + (NN) 177 + (LL) 288
1D Compatibility (HY) -9600 + (ID) 1400
Total energy: -49469.0 ( -106.38 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2YX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YX5-query.scw
PDB file :
Tito_Scwrl_2YX5.pdb
: