Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LETWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAENFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGAMLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE |
| 1QON Chain:A ((150-185)) | --------------------------------------GGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAF------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17415 for 152 contacts (-114.6/contact) +
2D Compatibility (PS) -3611 + (NN) 2800 + (LL) 15760
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -6316.0 ( -41.55 by residue)
QMean score : -0.101
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