Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVVIIGGGIVGASAAYLLSKENVQVTLIDSDE-AGQATRAAAGIICPWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSG-FGSVYVSGAARVNGGLFCETLLYAAKENGVKI--KAGRAHFSSDGEVVI------DGEKEHYDKLILATGAWLKDLLQDAGFQTDVLAQKGQLLELNFSEFQTDDWPV--ILPPSAKSIVPFDNGKIIVGATHEKAAGFNTEPTAEGKAEILTEVSQFMEGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR |
| 1NG3 Chain:A ((42-368)) | -----------------YYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQL------RQMDD--LDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANH---VVVASGVWSGMFFKQLGLNNAFLPVKGECLSV-----WNDDIPLTKTLYHDHCYIVPRKSGRLVVGAT-MKPGDWSETPDLGGLESVMKKAKTMLPPIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121974 for 2583 contacts (-47.2/contact) +
2D Compatibility (PS) -33947 + (NN) -11309 + (LL) 3324
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -187156.0 ( -72.46 by residue)
QMean score : 0.458
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