Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYKTKQSLDQLVQNGSTPGISYQIKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNN-VTILHLLTHSSGL--------AQNIPNF-SMNNR----EDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKLDG-NYEKAIQNNILEPLIMTNTSFHPVNKKQVIPTEL-------DQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQLGAPILSEKTWQLMQINHTPGLNRSRGLGWDLR------GESVLYHTG-----FTGTFMVLDLKRQASLIVLSNRVHPSRANPNFVDKRDSIVDTFIEEVSNTKEV |
1IKG Chain:A ((53-324)) | --------------------------------------------------TTTDRFRVGSVTKSFSAVV-LLQLVDEGKLDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFY--VHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAG----AVISSTQDLDTFFSALM---SGQLMSAA--QLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKR--SVTALAN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132998 for 1959 contacts (-67.9/contact) +
2D Compatibility (PS) -25810 + (NN) -14631 + (LL) 5944
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -189145.0 ( -96.55 by residue)
QMean score : 0.432
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