Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMPLVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFIIIAFAIFIFVKVLTSFIKKKEQTVEETPVPPTEEYLKEIRDLLKEQQK
4Y7K Chain:A ((26-97))
------EFKEFLYEYKVIPLAIAFIMGIASTALIKSFVDNIIMPIITPFVPGGGWETATVELGPIVISWGAFLGELVN--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Y7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33126 for 371 contacts (-89.3/contact) +
2D Compatibility (PS) -7525 + (NN) -1384 + (LL) 6172
1D Compatibility (HY) -10800 + (ID) 1250
Total energy: -47913.0 ( -129.15 by residue)
QMean score : 0.123
(partial model without unconserved sides chains):
PDB file :
Tito_4Y7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Y7K-query.scw
PDB file :
Tito_Scwrl_4Y7K.pdb
: