Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFRLGRMGGYVLTRHVGEHPRVLVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTV--SDYFEGKQKYIQYLKQTIENDF---NGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVGSTHPEA----LAAFVLDKK---ADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICA-KYLREQ--GLLNNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFLDHNTTGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVSKVIDEVEAEMAG-----------------NGRVLVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND |
| 1WQA Chain:A ((1-443)) | MGKLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKHFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELF--FKEDFDRAKWYEIGEVRREDII---KPYIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGY-----FPARNPEPNEENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGLLVTTVATSNLLDDIAKKHGAKVM-----RTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPKYYQ------IKTKRHVEGDRHA--IVNKV-AEMARERGYTVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174730 for 3771 contacts (-46.3/contact) +
2D Compatibility (PS) -44349 + (NN) -20124 + (LL) 2460
1D Compatibility (HY) -31600 + (ID) 8000
Total energy: -276343.0 ( -73.28 by residue)
QMean score : 0.490
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