Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LMKHLTLWHTNDVHSHLEHWPRIFN--FLKEKRTAAD-------KENQSALFFDIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEG----TTLAHEDLDKLYEHAVFPVVCCNFYTNKECTEQPDWVKSIVYKEIEQVKIAIIGATA------PFRDYYEEMGWGIEEPISSIKKQVAGLD--EDTDVVILLSHLG----------LPSDERIALEIP--EVDVILGGHTHHLL--------ETGKIEGNAL---------LAAAGRWGEYIGKVDIELDE------NNQILT---KTAMTFKTEDLPAAPNEANEIQGFFDKGRAELSEKVVAIPGKLAHNW----FDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTDFDIHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERAGFDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKWKLKKMYGQEEDK |
1HP1 Chain:A ((9-461)) | ----ITVLHTNDHHGHF--WRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQE-----KWAKFPLLSANIY--QKSTGERLFKPWALFKR-QDLKIAVIGLTTDDTAKIGNPEYFTDIEF--RKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKRVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPD-----------SGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMAT--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182043 for 3178 contacts (-57.3/contact) +
2D Compatibility (PS) -40878 + (NN) -5204 + (LL) 5612
1D Compatibility (HY) -16400 + (ID) 5050
Total energy: -243963.0 ( -76.77 by residue)
QMean score : 0.368
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