Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQIIRWKALLTRKALVTIFLGWLSLRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIMEEIIFRYIIPKELFAKHQKWGFVIGTLAFALIHSPSDIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN |
2WSW Chain:A ((135-170)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------AKEIGLAYSLFHW--GPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHVNGLFGTVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6396 for 145 contacts (-44.1/contact) +
2D Compatibility (PS) -3707 + (NN) 153 + (LL) 17228
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 5028.0 ( 34.68 by residue)
QMean score : -0.272
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