Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDSLVNNIEPTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPNGSLIFPGKLRGEDSFGMLCSARELALPNAPQVRGIIELSDQVIVGESFDANKHWKN
4P72 Chain:A ((46-144))
------------------------------------------------------------------------------------------------VVGEVLSTEQHPDADKLRVCQVS-NGSETFQVVCGAPNVRAGLKIPFAMIGAELPDDFKIKKAKLRGVESFGMLCSAKELQI--SEENAGLLELPADAPVGQDVRTYLELAD
General information:
TITO was launched using:
RESULT:
Template:
4P72.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74388 for 707 contacts (-105.2/contact) +
2D Compatibility (PS) -10785 + (NN) -5188 + (LL) 7436
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -91625.0 ( -129.60 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4P72.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P72-query.scw
PDB file :
Tito_Scwrl_4P72.pdb
: