Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILDDYEKELLVISHQIIAYLIKSGVNPSQAQDVTQDVFLQILESDFSL-PLDKIKAWMYRTTIRRYIDLYRRNKRYNEILQKEFFIENNLYYTESEKFFELHEAILHLKKDYQTLIDLYYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLEKDNFKI
1H3L Chain:A ((36-102))
------FERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTNTFINSYR-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33521 for 434 contacts (-77.2/contact) +
2D Compatibility (PS) -7163 + (NN) -2289 + (LL) 8416
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -37407.0 ( -86.19 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1H3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3L-query.scw
PDB file :
Tito_Scwrl_1H3L.pdb
: