Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY
3DLU Chain:A ((9-27))
------------------SELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLNPELRTFGMIVLESPYGKSKS
General information:
TITO was launched using:
RESULT:
Template:
3DLU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -786 for 85 contacts (-9.2/contact) +
2D Compatibility (PS) -1760 + (NN) 1234 + (LL) 2692
1D Compatibility (HY) 400 + (ID) 100
Total energy: 1680.0 ( 19.76 by residue)
QMean score : -0.321
(partial model without unconserved sides chains):
PDB file :
Tito_3DLU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLU-query.scw
PDB file :
Tito_Scwrl_3DLU.pdb
: